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Dr. André Soares

Fakultät für Chemie

Anschrift
Universitätsstr 5
45117 Essen
Raum
S05 T02 B36
Telefon
+49 201 183 - 6627
E-Mail
andre.rodrigues-soares@uni-due.de
Webseite
https://www.uni-due.de/probst-lab/

Funktionen

  • Wiss. Mitarbeiterinnen/Mitarbeiter, One Health Ruhr - Environmental Metagenomics

  • Wiss. Mitarbeiterinnen/Mitarbeiter, Prof. Probst

Aktuelle Veranstaltungen

Keine aktuellen Veranstaltungen.

Vergangene Veranstaltungen (max. 10)

Die folgenden Publikationen sind in der Online-Universitätsbibliographie der Universität Duisburg-Essen verzeichnet. Weitere Informationen finden Sie gegebenenfalls auch auf den persönlichen Webseiten der Person.

    Artikel in Zeitschriften

  • Hug, Laura A.; Hatzenpichler, Roland; Moraru, Liliana Cristina; Soares, André R.; Meyer, Folker; Heyder, Anke; Probst, Alexander J.; The Data Reuse Consortium
    A roadmap for equitable reuse of public microbiome data
    In: Nature Microbiology, Jg. 10, 2025, Nr. 10, S. 2384 – 2395
    DOI
  • Sures, Katharina; Esser, Sarah P.; Bornemann, Till; Moore, Carrie J.; Soares, André; Plewka, Julia; Figueroa-Gonzalez, Perla Abigail; Ruff, S. Emil; Moraru, Liliana Cristina; Probst, Alexander J.
    Acquisition of Spacers from Foreign Prokaryotic Genomes by CRISPR-Cas Systems in Natural Environments
    In: Genome Biology and Evolution, Jg. 17, 2025, Nr. 11, evaf201
    DOI (Open Access)
  • Hug, Laura A.; Hatzenpichler, Roland; Moraru, Cristina; Soares, André R.; Meyer, Folker; Heyder, Anke; Probst, Alexander J.; The Data Reuse Consortium
    Author Correction: A roadmap for equitable reuse of public microbiome data
    In: Nature Microbiology, 2025, in press
    DOI (Open Access)
  • Stach, Tom L.; Deep, Aman; Madge Pimentel, Iris; Buchner, Dominik; Borton, Mikayla A.; Soares, André; Starke, Jörn; Bornemann, Till; Rehsen, Philipp M.; Dreger, Ken; Boenigk, Jens; Vos, Matthijs; Leese, Florian; Beisser, Daniela; Probst, Alexander J.
    Complex compositional and metabolic response of river sediment microbiomes to multiple anthropogenic stressors
    In: ISME Communications: New Developments in Microbial Ecology, 2025, in press
    DOI (Open Access)
  • Stach, Tom L.; Starke, Jörn; Bouderka, Feriel; Bornemann, Till; Soares, André; Wilkins, Michael J.; Goldman, Amy E.; Stegen, James C.; Borton, Mikayla A.; Probst, Alexander J.
    Conserved environmental adaptations of stream microbiomes in the hyporheic zone across North America
    In: Microbiome, Jg. 13, 2025, Nr. 1, 253
    DOI (Open Access)
  • Esser, Sarah P.; Turzynski, Victoria; Plewka, Julia; Nuy, Julia; Moore, Carrie J.; Banas, Indra; Soares, André R.; Lee, Janey; Woyke, Tanja; Probst, Alexander J.
    Differential Expression of Core Metabolic Functions in Candidatus Altiarchaeum Inhabiting Distinct Subsurface Ecosystems
    In: Environmental Microbiology Reports, Jg. 17, 2025, Nr. 3, e70096
    DOI (Open Access)
  • Soares, André; Rassner, Sara Maria Edwards; Edwards, Arwyn; Farr, Gareth; Blackwell, Nia; Sass, Henrik; Persiani, Guglielmo; Schofield, David; Mitchell, Andrew C
    Hydrogeological and geological partitioning of iron and sulfur cycling bacterial consortia in subsurface coal-based mine waters
    In: FEMS Microbiology Ecology, Jg. 101, 2025, Nr. 5, fiaf039
    DOI (Open Access)
  • Simon, Sophie A; Soares, André R.; Bornemann, Till L. V.; Lange, Adrian; Griesdorn, Lea; Fuentes, Adrián; Dieckmann, Marie; Krok, Beate; Ruff, S Emil; Hügler, Michael; Moraru, Cristina; Probst, Alexander J.
    Inferring replication states of bacteria and viruses in enrichment cultures via long-read sequencing
    In: ISME Communications: New Developments in Microbial Ecology, Jg. 5, 2025, Nr. 1, ycaf041
    DOI, Online Volltext (Open Access)
  • Schnabel, Ellen; Vuillemin, Aurèle; Laczny, Cédric C.; Kunath, Benoit J.; Soares, André R.; Probst, Alexander J.; Di Primio, Rolando; Kallmeyer, Jens; Wilmes, Paul; Becher, Dörte; Rattei, Thomas; Trautwein-Schult, Anke; Mangelsdorf, Kai; Okolski, Steffen; Kitte, J. Axel; Hickl, Oskar; Lowndes, Tuesday; Zafar, Zainab; Esser, Sarah; Ostrzinski, Anne; Grund, Sebastian; Pfundner, Alexander; PROSPECTOMICS Consortium
    Influence of minor hydrocarbon seepage on sulfur cycling in marine subsurface sediments
    In: Biogeosciences (BG), Jg. 22, 2025, Nr. 3, S. 767 – 784
    DOI (Open Access)
  • Plewka, Julia; Alibrandi, Armando; Bornemann, Till; Esser, Sarah P; Stach, Tom L; Sures, Katharina; Becker, Jannis; Moraru, Liliana Cristina; Soares, André; di Primio, Rolando; Kallmeyer, Jens; Probst, Alexander J.
    Metagenomic analysis of pristine oil sheds new light on the global distribution of microbial genetic repertoire in hydrocarbon-associated ecosystems
    In: microLife, Jg. 6, 2025, uqae027
    DOI, Online Volltext (Open Access)
  • Ostrzinski, Anne; Kunath, Benoit J; Soares, André Rodrigues; Laczny, Cédric C; Halder, Rashi; Kallmeyer, Jens; Di Primio, Rolando; Wilmes, Paul; Probst, Alexander J; Trautwein-Schult, Anke; Becher, Dörte; Rodrigues Soares, André
    Systematic evaluation of protein extraction for metaproteomic analysis of marine sediment with high clay content
    In: ISME Communications: New Developments in Microbial Ecology, Jg. 5, 2025, Nr. 1, ycaf074
    DOI (Open Access)
  • Táncsics, András; Bedics, Anna; Banerjee, Sinchan; Soares, André; Baka, Erzsébet; Probst, Alexander J.; Kriszt, Balázs
    Stable-isotope probing combined with amplicon sequencing and metagenomics identifies key bacterial benzene degraders under microaerobic conditions
    In: Biologia Futura, Jg. 75, 2024, Nr. 3, S. 301 – 311
    DOI (Open Access)
  • Moore, Carrie Julia; Bornemann, Till; Figueroa-Gonzalez, Perla Abigail; Esser, Sarah P; Moraru, Liliana Cristina; Soares, André; Hinzke, Tjorven; Trautwein-Schult, Anke; Maaß, Sandra; Becher, Dörte; Starke, Joern; Plewka, Julia; Rothe, Lousia; Probst, Alexander J.
    Time-series metaproteogenomics of a high-CO2 aquifer reveals active viruses with fluctuating abundances and broad host ranges
    In: microLife, Jg. 5, 2024, uqae011
    DOI, Online Volltext (Open Access)
  • Meyer, Benjamin; Pannekens, Mark; Soares, André; Timmermann, Lara; Probst, Alexander J.; Hippelein, Martin; Bendinger, Bernd; Nocker, Andreas
    Bacterial populations in different parts of domestic drinking water systems are distinct and adapted to the given ambient temperatures
    In: Frontiers in Water, Jg. 5, 2023, 1119951
    DOI (Open Access)
  • Táncsics, András; Banerjee, Sinchan; Soares, André; Bedics, Anna; Kriszt, Balázs
    Combined Omics Approach Reveals Key Differences between Aerobic and Microaerobic Xylene-Degrading Enrichment Bacterial Communities : Rhodoferax─A Hitherto Unknown Player Emerges from the Microbial Dark Matter
    In: Environmental Science & Technology, Jg. 57, 2023, Nr. 7, S. 2846 – 2855
    DOI
  • Simon, Sophie A.; Schmidt, Katharina; Griesdorn, Lea; Soares, André R.; Bornemann, Till L. V.; Probst, Alexander J.
    Dancing the Nanopore limbo – Nanopore metagenomics from small DNA quantities for bacterial genome reconstruction
    In: BMC Genomics, Jg. 24, 2023, Nr. 1, 727
    DOI, Online Volltext (Open Access)
  • Rahlff, Janina; Esser, Sarah P.; Plewka, Julia; Heinrichs, Mara Elena; Soares, André; Scarchilli, Claudio; Grigioni, Paolo; Wex, Heike; Giebel, Helge-Ansgar; Probst, Alexander J.
    Marine viruses disperse bidirectionally along the natural water cycle
    In: Nature Communications, Jg. 14, 2023, Nr. 1, 6354
    DOI, Online Volltext (Open Access)
  • Hay, Melanie C.; Mitchell, Andrew C.; Soares, André; Debbonaire, Aliyah R.; Mogrovejo, Diana C.; Els, Nora; Edwards, Arwyn
    Metagenome-assembled genomes from High Arctic glaciers highlight the vulnerability of glacier-associated microbiota and their activities to habitat loss
    In: Microbial Genomics, Jg. 9, 2023, Nr. 11, 001131
    DOI (Open Access)
  • Banas, Indra; Esser, Sarah P.; Turzynski, Victoria; Soares, André; Novikova, Polina; May, Patrick; Moraru, Cristina; Hasenberg, Mike; Rahlff, Janina; Wilmes, Paul; Klingl, Andreas; Probst, Alexander J.
    Spatio-functional organization in virocells of small uncultivated archaea from the deep biosphere
    In: ISME Journal, Jg. 17, 2023, Nr. 10, S. 1789 – 1792
    DOI (Open Access)
  • Stach, Tom L.; Sieber, Guido; Shah, Manan; Simon, Sophie A.; Soares, André; Bornemann, Till L. V.; Plewka, Julia; Künkel, Julian; Becker, Christian; Meyer, Folker; Boenigk, Jens; Probst, Alexander J.
    Temporal disturbance of a model stream ecosystem by high microbial diversity from treated wastewater
    In: MicrobiologyOpen, Jg. 12, 2023, Nr. 2, e1347
    DOI, Online Volltext (Open Access)
  • Turzynski, Victoria; Griesdorn, Lea; Moraru, Cristina; Soares, André; Simon, Sophie A.; Stach, Tom L.; Rahlff, Janina; Esser, Sarah P.; Probst, Alexander J.
    Virus-Host Dynamics in Archaeal Groundwater Biofilms and the Associated Bacterial Community Composition
    In: Viruses, Jg. 15, 2023, Nr. 4, 910
    DOI (Open Access)
  • Monsees, Indra; Turzynski, Victoria; Esser, Sarah P.; Soares, Andre; Timmermann, Lara I.; Weidenbach, Katrin; Banas, Jarno; Kloster, Michael; Beszteri, Bank; Schmitz, Ruth A.; Probst, Alexander J.
    Erratum for Monsees et al., “Label-Free Raman Microspectroscopy for Identifying Prokaryotic Virocells”
    In: mSystems, Jg. 7, 2022, Nr. 2, e00162-22
    DOI (Open Access)
  • Banerjee, Sinchan; Bedics, Anna; Tóth, Erika; Kriszt, Balázs; Soares, André R.; Bóka, Károly; Táncsics, András
    Isolation of Pseudomonas aromaticivorans sp. nov from a hydrocarbon-contaminated groundwater capable of degrading benzene-, toluene-, m- and p-xylene under microaerobic conditions
    In: Frontiers in Microbiology, Jg. 13, 2022, 929128
    DOI (Open Access)
  • Monsees, Indra; Turzynski, Victoria; Esser, Sarah P.; Soares, André; Timmermann, Lara I.; Weidenbach, Katrin; Banas, Jarno; Kloster, Michael; Beszteri, Bank; Schmitz, Ruth A.; Probst, Alexander J.
    Label-Free Raman Microspectroscopy for Identifying Prokaryotic Virocells
    In: mSystems, Jg. 7, 2022, Nr. 1, e01505-21
    DOI (Open Access)

    • Preprints

  • Stach, Tom L.; Starke, Jörn; Bouderka, Feriel; Bornemann, Till; Soares, André; Wilkins, Michael J.; Goldman, Amy E.; Stegen, James C.; Borton, Mikayla A.; Probst, Alexander J.
    A uniform stress response of stream microbiomes in the hyporheic zone across North America
    2025
    DOI (Open Access)
  • Stach, Tom Lennard; Deep, Aman; Madge Pimentel, Iris; Buchner, Dominik; Borton, Mikayla; Soares, André; Starke, Joern; Bornemann, Till; Rehsen, Philipp M.; Boenigk, Jens; Vos, Matthijs; Leese, Florian; Beisser, Daniela; Probst, Alexander J.
    Complex compositional and cellular response of river sediment microbiomes to multiple anthropogenic stressors
    2024
    DOI (Open Access)

    • Forschungsdaten

  • Soares, André
    16SNAME_SILVA_RefSeq_databases_11042021
    2021
    DOI (Open Access)