Curriculum Water Science - Environmental Microbiology
Lecture material
- Lecture plan
- Introduction to Environmental Microbiology - energetic principles
- Thermodynamics and Clostridium acetobutylicum
- Redox gradients and transport - Cable bacteria
- Contaminant degradation: hydrocarbons
- Contaminant degradation: anaerobic degradation of hydrocarbons
- Reductive dehalogenation
- Population analysis I
- Population analysis II
- Population analysis III
- Poly-omics I
- Poly-omics II
- Poly-omics III and gene transfer
- Wrap-up session Siebers
- Wrap-up session Meckenstock
Tutorial
- List of seminar topics
- Q & A for lecture 20/10/2014
- Q & A for lecture 27/10/2014
- Q & A for lecture 03/11/2014
- Q & A for lecture 10/11/2014
- Q & A for lecture 17/11/2014
- Q & A for lecture 01/12/2014
- Q & A for lecture 08/12/2014
- Q & A for lecture 15/12/2014
- Gene and genome analysis
- Bioinformatic exercises II
Additional Material
- Water droplets in oil are microhabitats for microbial life (Meckenstock et al., 2014)
- The microbial ocean from genomes to biomes (DeLong et al., 2009)
- Single-cell sequencing
- Biodegradation: Updating the concepts of control for microbial clean-up in contaminated aquifers
Previous lectures
- Material from last year (not relevant for current lecture!)