© UDE/Bettina Engel-Albustin

Area A - Biology and Molecular Oncology

Prof. Dr. Annette Paschen

Department of Dermatology

University Hospital Essen

Phone: +49 201 723 2406
Email

IFNγ -induced cell state transition in melanoma

The cytokine IFNγ is released by T lymphocytes in the course of an anti-tumor immune response. IFNγ-driven JAK1/2-STAT1 signalling in tumor cells can induce cell death, which is critical for T cell-mediated disease control. Also, the clinical success of melanoma immunotherapy is dependent on intact JAK1/2-STAT1 signalling in tumor cells. In line with this, resistance to immunotherapy has been associated with defective IFNγ signaling in melanoma cells caused by inactivating JAK1/2 mutations. But, therapy resistance, which is a major challenge in clinical care, cannot be explained solely by genetic alterations in tumor cells. Recently, melanoma cell plasticity emerged as a barrier to effective therapy. The capacity to switch between different transcriptional programs and transit between heterogeneous cell states allows melanoma cells to adapt to and survive selective pressures of the microenvironment. We observed that some melanoma cells escape IFNγ-induced cell death by switching into a non-proliferative IFNγ-tolerant cell state. Those cells resume proliferation upon cytokine depletion, thereby contributing to disease progression. Within the CRC1430 we aim to identify central regulators of IFNγ-induced cell state transition, monitor state transition at the single cell level and define phenotypic cell state heterogeneity. Understanding the development, maintenance and specific features of IFNγ-tolerant melanoma cells will uncover new therapeutic targets allowing us to shift the balance from IFNγ-tolerance towards cell death in order to improve the efficacy of melanoma immunotherapy.

Project Members

Dr. Fang Zhao

fang.zhao@uk-essen.de

Dr. Philine Steinbach

philine.steinbach@uk-essen.de

Dr. Johanna A. Seier

johannaandrea.seier@uk-essen.de

Publications

    Journal articles

  • Wagner, Jessica; Feller, Konstantina; Schrenke, Nicole; Schulze, Nina; Paschen, Annette; Dehmelt, Leif; Nalbant, Perihan
    Optogenetic stimulation of Lbc GEF-mediated Rho activity dynamics promotes cell invasion
    In: Molecular Biology of the Cell, Vol. 36, 2025, Nr. 11
  • Stubenvoll, Antonia; Schmidt, Maria; Moeller, Johanna; Chango, Max Alexander Lingner; Schultz, Carolyn; Antoniadou, Olga; Loeffler-Wirth, Henry; Bernhart, Stephan; Große, Florian; Thier, Beatrice; Paschen, Annette; Anderegg, Ulf; Simon, Jan C.; Ziemer, Mirjana; Schoeder, Clara T.; Binder, Hans; Kunz, Manfred
    Single-cell transcriptomics and epigenomics point to CD58-CD2 interaction in controlling primary melanoma growth and immunity
    In: Cancer Communications, Vol. 45, 2025, Nr. 4, pp. 465 – 470
  • Fischer, Kim Denise; Tiwari, Shashank; Thier, Beatrice; Qiu, Lin Christina; Lin, Tzu-Chen; Paschen, Annette; Imig, Jochen
    Long non-coding RNA GRASLND links melanoma differentiation and interferon-gamma response
    In: Frontiers in Molecular Biosciences, Vol. 11, 2024, 1471100
  • Stupia, Simone; Heeke, Christina; Brüggemann, Alicia; Zaremba-Montenari, Anne; Thier, Beatrice; Kretz, Julia; Sucker, Antje; Philip, Manuel; Zelinskyy, Gennadiy; Ferrone, Soldano; Rösch, Alexander; Horn, Susanne; Hadaschik, Eva; Schadendorf, Dirk; Trilling, Mirko; Dittmer, Ulf; Griewank, Klaus; Zhao, Fang; Paschen, Annette
    HLA class II loss and JAK1/2 deficiency coevolve in melanoma leading to CD4 T cell and IFNγ cross-resistance
    In: Clinical Cancer Research, Vol. 29, 2023, Nr. 15, pp. 2894 – 2907
  • Váraljai, Renáta; Zimmer, Lisa; Al-Matary, Yahya; Kaptein, Paulien; Albrecht, Lea J.; Shannan, Batool; Brase, Jan C.; Gusenleitner, Daniel; Amaral, Teresa; Wyss, Nina; Utikal, Jochen; Flatz, Lukas; Rambow, Florian; Reinhardt, Hans Christian; Dick, Jenny; Engel, Daniel R.; Horn, Susanne; Ugurel, Selma; Sondermann, Wiebke; Livingstone, Elisabeth; Sucker, Antje; Paschen, Annette; Zhao, Fang; Placke, Jan-Malte; Klose, Jasmin M.; Fendler, Wolfgang; Thommen, Daniela S.; Helfrich, Iris; Schadendorf, Dirk; Rösch, Alexander
    Interleukin 17 signaling supports clinical benefit of dual CTLA-4 and PD-1 checkpoint inhibition in melanoma
    In: Nature Cancer, Vol. 4, 2023, Nr. 9, pp. 1292 – 1308
  • Thier, Beatrice; Zhao, Fang; Stupia, Simone; Brüggemann, Alicia; Koch, Johannes; Schulze, Nina; Horn, Susanne; Coch, Christoph; Hartmann, Gunther; Sucker, Antje; Schadendorf, Dirk; Paschen, Annette
    Innate immune receptor signaling induces transient melanoma dedifferentiation while preserving immunogenicity
    In: Journal for ImmunoTherapy of Cancer, Vol. 10, 2022, Nr. 6, e003863
  • Chauvistré, Heike; Shannan, Batool; Daignault-Mill, Sheena M.; Ju, Robert J.; Picard, Daniel; Egetemaier, Stefanie; Váraljai, Renáta; Gibhardt, Christine S.; Sechi, Antonio; Kaschani, Farnusch; Keminer, Oliver; Stehbens, Samantha J.; Liu, Qin; Yin, Xiangfan; Jeyakumar, Kirujan; Vogel, Felix C. E.; Krepler, Clemens; Rebecca, Vito W.; Kubat, Linda; Lueong, Smiths S.; Forster, Jan; Horn, Susanne; Remke, Marc; Ehrmann, Michael; Paschen, Annette; Becker, Jürgen; Helfrich, Iris; Rauh, Daniel; Kaiser, Markus; Gul, Sheraz; Herlyn, Meenhard; Bogeski, Ivan; Rodríguez-López, José Neptuno; Haass, Nikolas K.; Schadendorf, Dirk; Rösch, Alexander
    Persister state-directed transitioning and vulnerability in melanoma
    32. Deutscher Hautkrebskongress (ADO-Jahrestagung), 14.–17. September 2022, Hannover, Germany,
    In: Nature Communications, Vol. 13, 2022, Nr. 1, pp. 35 – 36
  • Preprints

  • Egetemaier, Stefanie; Chauvistré, Heike; Váraljai, Renáta; Hua, Yichao; Lueong, Smiths; Makhzami, Samira; Srinivas, Nalini; Forster, Jan; Ullrich, Vivien; Stupia, Simone; Schroeder, Valéria; Scharfenberg, Sarah; Hoewner, Anna; Shannan, Batool; Siveke, Jens; Baietti, Maria Francesca; Leucci, Eleonora; Marine, Jean-Christophe; Paschen, Annette; Scheffler, Björn; Engel, Daniel R.; Becker, Lisa; Nensa, Felix; Köster, Johannes; Grünwald, Barbara; Poepsel, Simon; Ninck, Sabrina; Kaschani, Farnusch; Schadendorf, Dirk; Becker, Jürgen; Tasdogan, Alpaslan; Rambow, Florian; Rösch, Alexander
    Redirecting resistance evolution in BRAFV600 melanoma by inhibition of the peroxiredoxin-thioredoxin system
    2025
  • Klink, Nikolas; Urban, Sebastian; Seier, Johanna A.; Adhikari, Bikash; Schwalm, Martin P.; Müller, Juliane; Dorsch, Madeleine; Kaschani, Farnusch; Koch, Johannes; Führer, Siska; Kaiser, Markus; Schulze, Nina; Knapp, Stefan; Wolf, Elmar; Paschen, Annette; Grüner, Barbara M.; Gersch, Malte
    Targeted degradation of USP7 in solid cancer cells reveals disparate effects of deubiquitinase inhibition vs. acute protein depletion
    2025